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Ensembl Genomes Release 12 Notes

Released: 13th December 2011

General

  • update to Ensembl 65 software
  • new Pan Compara database
  • updated pan concern databases from Ensembl

Metazoa

  • addition of Atta cephalotes genome
  • addition of Bombyx mori genome
  • addition of Tribolium casteneum genome
  • updated compara
  • updated biomart

Bacteria

  • update to Escherichia/Shigella clade database to show operon data from RegulonDB for E. coli K12
  • updated compara databases
  • updated biomarts

Protists

  • updated biomarts

Fungi

  • Update of Schizosaccharomyces pombe to latest PomBase data
  • addition of Ashbya gossypii genome
  • removal of 2-micron plasmid from the Saccharomyces cerevisiae reference genome
  • updated Gibberella zeae variations with rsIDs
  • updated crossreferences for Mycosphaerella graminicola
  • Added RNA-Seq alignments datasets for Puccinia Triticina
  • addition of DNA alignments between Ashbya gossypii and Saccharomyces cerevisiae
  • updated peptide compara database
  • updated biomarts

Plants

  • addition of Cyanidioschyzon merolae 10D genome
  • update to soybean gene set
  • update to Physcomitrella patens gene set
  • updated peptide compara
  • updated biomarts